Bioconductor
The gold standard for high-throughput genomic data analysis and reproducible bioinformatics.
Updated 14d ago
Has API
PricingFree
Free
Differential gene expression analysis
Single-cell RNA-seq processing
Genomic annotation and mapping
Allen Brain Atlas
4.7
Free Highly regarded for its comprehensive datasets and user-friendly interface, though some users find the programmatic access initially challenging.
A comprehensive resource for exploring brain anatomy, cell types, and gene expression.
Free pricingAPI availableUpdated 2026-03-17
Best fits
Brain MappingGene Expression Analysis
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About Allen Brain Atlas
The Allen Brain Atlas is a multifaceted platform providing extensive data and tools for neuroscience research. It offers high-resolution anatomical reference atlases for human and mouse brains, including developing stages and the spinal cord. The platform integrates gene expression data, cell type classifications, and connectivity maps, facilitating a comprehensive understanding of brain structure and function. Users can access data programmatically via APIs and the AllenSDK (Software Development Toolkit), enabling custom analyses and integration with other bioinformatics tools. Jupyter notebooks provide tutorials for data access and analysis, promoting reproducible research and accelerating discoveries in brain science.
Core Capabilities
The Allen Brain Atlas is a multifaceted platform providing extensive data and tools for neuroscience research.
Main Tasks
Analyze gene expression
Explore all tools that specialize in analyze gene expression. This domain focus ensures Allen Brain Atlas delivers optimized results for this specific requirement.