
MDAnalysis
The industry-standard Python library for high-performance molecular dynamics trajectory analysis.

The industry-standard Python library for high-performance molecular dynamics trajectory analysis.

High-performance molecular dynamics and electronic structure simulations for materials science.
Rosetta Commons provides cutting-edge computational methods and shared software for biomolecular modeling and design, fostering open science and accelerating discovery through community collaboration.
Model, simulate, and analyze biochemical systems with a single tool.
Brian is a free, open source simulator for spiking neural networks designed for ease of use, flexibility, and extensibility.